Last updated on 2025-12-16 01:50:20 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.44 | 244.99 | 257.43 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.18 | 220.22 | 230.40 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 23.00 | 317.11 | 340.11 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 29.00 | 402.64 | 431.64 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.20 | 300.73 | 315.93 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.77 | 256.04 | 269.81 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 221.00 | 232.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 187.00 | 208.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 203.00 | 214.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 238.00 | 262.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/152s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.793, system: 0.099, elapsed: 3.185 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.071, system: 0.432, elapsed: 16.099 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.021, elapsed: 0.257 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.271, system: 0.359, elapsed: 7.362 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.005, elapsed: 0.347 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.079, system: 0.949, elapsed: 28.110 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.615, system: 0.041, elapsed: 2.989 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.642, system: 0.102, elapsed: 14.631 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.012, elapsed: 0.279 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.087, system: 0.189, elapsed: 6.264 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.004, elapsed: 0.245 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.275, system: 0.373, elapsed: 25.260 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.582, system: 0.034, elapsed: 2.268 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.546, system: 0.094, elapsed: 19.417 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.012, elapsed: 0.540 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.994, system: 0.172, elapsed: 11.306 seconds]
Computing values for grid cells...
... done. [user: 0.190, system: 0.016, elapsed: 0.552 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.255, system: 0.266, elapsed: 2.186 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.418, system: 0.625, elapsed: 37.714 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.536, system: 0.035, elapsed: 3.598 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.485, system: 0.086, elapsed: 19.472 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.012, elapsed: 0.453 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.988, system: 0.182, elapsed: 9.166 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.006, elapsed: 0.549 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.847, system: 0.503, elapsed: 18.323 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.889, system: 0.849, elapsed: 53.287 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [84s/146s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.594, system: 0.036, elapsed: 3.070 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.432, system: 0.075, elapsed: 17.902 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.015, elapsed: 0.394 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.759, system: 0.192, elapsed: 7.033 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.005, elapsed: 0.360 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.740, system: 0.348, elapsed: 29.835 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.593, system: 0.030, elapsed: 2.969 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.443, system: 0.056, elapsed: 16.319 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.011, elapsed: 0.307 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.875, system: 0.173, elapsed: 6.087 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.004, elapsed: 0.233 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.835, system: 0.303, elapsed: 26.927 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.577, system: 0.030, elapsed: 2.446 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.840, system: 0.250, elapsed: 16.969 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.018, elapsed: 0.380 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.944, system: 0.278, elapsed: 5.980 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.011, elapsed: 0.269 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.144, system: 0.272, elapsed: 1.070 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.552, system: 0.894, elapsed: 28.191 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.700, system: 0.056, elapsed: 3.266 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.570, system: 0.136, elapsed: 20.338 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.012, elapsed: 0.302 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.773, system: 0.180, elapsed: 6.070 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.002, elapsed: 0.294 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.781, system: 0.488, elapsed: 20.667 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.856, system: 0.903, elapsed: 52.037 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64