Last updated on 2026-01-17 09:49:57 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.4 | 4.06 | 36.51 | 40.57 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.4 | 3.13 | 27.62 | 30.75 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.1.4 | 7.00 | 54.27 | 61.27 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.1.4 | 7.00 | 51.12 | 58.12 | OK | |
| r-devel-windows-x86_64 | 0.1.4 | 6.00 | 77.00 | 83.00 | OK | |
| r-patched-linux-x86_64 | 0.1.4 | 3.88 | 32.81 | 36.69 | OK | |
| r-release-linux-x86_64 | 0.1.4 | 4.07 | 33.20 | 37.27 | OK | |
| r-release-macos-arm64 | 0.1.4 | OK | ||||
| r-release-macos-x86_64 | 0.1.4 | 3.00 | 53.00 | 56.00 | OK | |
| r-release-windows-x86_64 | 0.1.4 | 6.00 | 77.00 | 83.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 0.1.4 | 3.00 | 58.00 | 61.00 | OK | |
| r-oldrel-windows-x86_64 | 0.1.4 | 7.00 | 96.00 | 103.00 | OK |
Version: 0.1.4
Check: examples
Result: ERROR
Running examples in ‘extractFAERS-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: timetodayFAERS
> ### Title: Change all time units to days in the data filtered by
> ### filter_by_occu_FAERS(). This function converts age and time units in
> ### the data to days, and processes occupation and reaction data.
> ### Aliases: timetodayFAERS time_to_day_FAERS
>
> ### ** Examples
>
> # Example_1 Perform FAERS data preprocessing in one step and
> # generate `F_COREDATA_1PS_PROF_STU.RData` in a temporary folder.
> # In practice, it is recommended to set `usetempdir = FALSE` and specify `workingdir`
> # to prevent the processed results in the temporary folder from being automatically deleted.
> extract_FAERS_data(
+ workingdir = system.file("extdata", package = "extractFAERS"),
+ usetempdir = TRUE,
+ corenum = 2,
+ startfile = 1,
+ endfile = 4,
+ onlydoextract = FALSE,
+ occpextract = NULL
+ )
Found the following .zip files:
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/extractFAERS/extdata/faers_ascii_2015q1_example.zip/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/extractFAERS/extdata/faers_ascii_2015q2_example.zip/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/extractFAERS/extdata/faers_ascii_2015q3_example.zip/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/extractFAERS/extdata/faers_ascii_2015q4_example.zip
Extracting:faers_ascii_2015q1_example.zip
Extracting:faers_ascii_2015q2_example.zip
Extracting:faers_ascii_2015q3_example.zip
Extracting:faers_ascii_2015q4_example.zip
Extraction complete. All files are now in:/tmp/Rtmpf7DJnB
Files have been organized.
[1] "/tmp/Rtmpf7DJnB/INDEX1PS/"
[1] "/tmp/Rtmpf7DJnB/DEMO1PS/"
[1] "/tmp/Rtmpf7DJnB/INDI1PS/"
[1] "/tmp/Rtmpf7DJnB/REAC1PS/"
Extracting DRUG data, This may take minitues to hours
Extracting /tmp/Rtmpf7DJnB/DEMO/ data, This may take minitues to hours
Error in serverSocket(port = port) :
creation of server socket failed: port 11246 cannot be opened
Calls: extract_FAERS_data -> makeCluster -> makePSOCKcluster -> serverSocket
Execution halted
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
extract1PSFAERS 0.475 0.146 11.267
filterbyoccpFAERS 0.189 0.036 10.580
Flavor: r-devel-linux-x86_64-debian-gcc