YEASTPMID {YEAST} | R Documentation |
PubMed http://www.ncbi.nlm.nih.gov/PubMed/ includes over 14 million citations for biomedical articles back to the 1950's. Each article has a unique PubMed identifier. YEASTPMID maps probe identifiers to PubMed identifier for publications that cited the genes represented by the probe identifiers
Titles, abstracts, and possibly full texts of articles can be obtained from PubMed by providing a valid PubMed id. The pubmed function of annotate can also be used for the same purpose.
Mappings were based on data provided by:
Yeast Genome:http://www.yeastgenome.org/DownloadContents.shtml. Built: Yeast Genome data are built at various time intervals. Sources used were downloaded Fri Jan 7 14:56:40 2005
Package built Fri Jan 7 16:12:38 2005
http://www.ncbi.nlm.nih.gov/LocusLink
# Convert the environment to a list xx <- as.list(YEASTPMID) if(length(xx) > 0){ # The probe ids for the first two elements of XX xx[1:2] # Get the first one xx[[1]] if(interactive() && !is.null(xx[[1]]) && !is.na(xx[[1]]) && require(annotate)){ # Gets article information as XML files xmls <- pubmed(xx[[1]], disp = "data") # Views article information using a browser pubmed(xx[[1]], disp = "browser") } }