invokePhase-methods {GGtools}R Documentation

~~ Methods for Function invokePhase in Package ‘GGtools’ ~~

Description

~~ Methods for function invokePhase in Package `GGtools' ~~

Methods

x = "snp.matrix", cnum = "chrnum", parmstring = "character", globpname = "character", where2run = "character", doParse = "logical"
transform snp.matrix entity to phaseInput (uses tempfile()) and invokes PHASE
x = "phaseInput", cnum = "chrnum", parmstring = "character", globpname = "character", where2run = "character", doParse = "logical"
for prepared 'phaseInput' structure, invoke PHASE

Examples

## Not run: 
data(smtest)
invokePhase(smtest, chrnum(20), "", Sys.getenv("PHASE_LOC"),
   ".", TRUE)
## End(Not run)

[Package GGtools version 3.2.0 Index]