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graph, Biobase, Hmisc Suggests: Rgraphviz Package: Ruuid Version: 1.20.0 Depends: R (>= 2.6.0), methods Imports: methods Package: SAGElyzer Version: 1.17.0 Depends: R (>= 1.6.0),AnnBuilder,tkWidgets,genefilter,annotate,Biobase,tcltk Package: SAGx Version: 1.16.0 Depends: R (>= 2.5.0), stats, multtest, methods Imports: Biobase Suggests: KEGG.db, hu6800.db Package: SBMLR Version: 1.36.0 Depends: XML, odesolve Package: SIM Version: 1.10.0 Depends: R (>= 2.4), fields, globaltest, marray, quantsmooth, clac, multtest Package: SLGI Version: 1.2.0 Depends: R (>= 2.6.0), ScISI, lattice, methods, org.Sc.sgd.db, GO.db Imports: Biobase, Biostrings, lattice, AnnotationDbi Package: SLqPCR Version: 1.8.0 Depends: R(>= 2.4.0), stats, RColorBrewer Package: SMAP Version: 1.6.0 Depends: methods Package: SNPchip Version: 1.6.0 Depends: R (>= 2.6.0), Biobase (>= 1.15.19), methods, oligoClasses (>= 1.1.13), graphics Suggests: RSQLite, geneplotter, stats, graphics, VanillaICE, RColorBrewer Package: ScISI 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Package: affycomp Version: 1.18.0 Depends: R (>= 2.4.0), methods, Biobase (>= 1.13.57) Suggests: splines Package: affycoretools Version: 1.14.1 Depends: affy, limma, GOstats, biomaRt, gcrma, Biobase, annotate, xtable, annaffy, AnnotationDbi Suggests: affydata, hgfocuscdf Package: affyio Version: 1.10.1 Depends: R (>= 2.6.0), methods Package: affylmGUI Version: 1.16.0 Depends: limma, tcltk, affy, Biobase, affyio Suggests: tkrplot, affyPLM, R2HTML, xtable Package: affypdnn Version: 1.16.0 Depends: R (>= 2.3.0), affy (>= 1.5) Suggests: affydata, hgu95av2probe Package: altcdfenvs Version: 2.4.0 Depends: R (>= 2.7), methods, Biobase, affy, matchprobes, makecdfenv, Biostrings, hypergraph Suggests: plasmodiumanophelescdf, hgu95acdf, hgu133aprobe, hgu133a.db, hgu133acdf, Rgraphviz, RColorBrewer Package: annaffy Version: 1.14.0 Depends: R (>= 2.5.0), methods, Biobase, GO.db, KEGG.db Imports: AnnotationDbi (>= 0.1.15) Suggests: hgu95av2.db, multtest, tcltk Package: annotate Version: 1.20.1 Depends: R (>= 2.4.0), methods, Biobase, AnnotationDbi (>= 0.1.15), xtable Imports: methods, AnnotationDbi (>= 0.1.15) Suggests: hgu95av2.db, genefilter, Biostrings (>= 2.4.4), rae230a.db, rae230aprobe, tkWidgets, XML (>= 0.92-2), GO.db, org.Hs.eg.db, org.Mm.eg.db, hom.Hs.inp.db Package: annotationTools Version: 1.12.0 Depends: Biobase Package: apComplex Version: 2.8.0 Depends: graph, RBGL, Rgraphviz, org.Sc.sgd.db Package: aroma.light Version: 1.10.0 Depends: R.methodsS3 Suggests: R.oo, R.utils Package: arrayMvout Version: 1.0.0 Depends: R (>= 2.6.0), tools, methods, utils, parody, Biobase, affy, lumi Imports: simpleaffy, mdqc, affyContam, Suggests: MAQCsubset, mvoutData, lumiBarnes, affyPLM, affydata Package: arrayQualityMetrics Version: 1.8.1 Depends: R (>= 2.6.0), Biobase (>= 1.15.13), geneplotter (>= 1.15.2), genefilter(>= 1.17.12), vsn (>= 3.4.8), RColorBrewer, affyPLM, simpleaffy, lattice, latticeExtra, grid, beadarray, methods, marray Suggests: CCl4 (>= 1.0.7), ALLMLL Package: arrayQuality Version: 1.20.0 Depends: R (>= 2.2.0), marray, limma, convert, hexbin, gridBase, RColorBrewer Suggests: mclust, MEEBOdata, HEEBOdata Package: beadarraySNP Version: 1.8.0 Depends: methods, tools, Biobase, quantsmooth Suggests: aCGH, affy, limma, snapCGH, beadarray Package: beadarray Version: 1.10.0 Depends: limma, Biobase, methods, geneplotter, hwriter, sma Suggests: lumi, vsn, affy, Package: bgafun Version: 1.4.0 Depends: made4, seqinr,ade4 Package: bgx Version: 1.6.0 Depends: R (>= 2.0.1), Biobase, affy (>= 1.5.0), gcrma (>= 2.4.1) Suggests: affydata, hgu95av2cdf Package: bioDist Version: 1.14.0 Depends: R (>= 2.0), methods, Biobase Suggests: locfit Package: biocGraph Version: 1.4.0 Depends: graph, geneplotter, Rgraphviz, Biobase, fibroEset, hgu95av2.db, methods Suggests: XML Package: biocViews Version: 1.10.6 Depends: R (>= 2.4.0), methods, utils Imports: tools, Biobase, graph (>= 1.9.26), RBGL (>= 1.13.5), XML Suggests: Biobase Package: biomaRt Version: 1.16.0 Depends: methods Imports: XML, RCurl Suggests: annotate Package: bridge Version: 1.6.0 Depends: R (>= 1.9.0), rama Package: cellHTS2 Version: 2.6.0 Depends: R (>= 2.6.0), prada (>= 1.9.4), RColorBrewer, Biobase (>= 1.11.12), methods, genefilter (>= 1.11.2), splots (>= 1.3.2), vsn (>= 3.0.15) Suggests: locfit (>= 1.5-3) Package: cellHTS Version: 1.12.0 Depends: R (>= 2.5.0), prada (>= 1.9.4), RColorBrewer, Biobase (>= 1.11.12), genefilter (>= 1.11.2) Suggests: Category, GO.db, vsn (>= 2.0.35) Package: cghMCR Version: 1.12.0 Depends: methods, DNAcopy, marray, arrayQuality Package: clusterStab Version: 1.14.0 Depends: Biobase (>= 1.4.22), R (>= 1.9.0), methods Suggests: fibroEset, genefilter Package: codelink Version: 1.10.0 Depends: methods, Biobase, limma, annotate, genefilter Package: convert Version: 1.18.0 Depends: R (>= 2.6.0), Biobase (>= 1.15.33), limma (>= 1.7.0), marray, utils, methods Package: copa Version: 1.10.0 Depends: Biobase, methods Suggests: colonCA Package: cosmoGUI Version: 1.8.0 Depends: tkWidgets, cosmo Package: cosmo Version: 1.8.0 Depends: R (>= 2.4.0), methods, utils, seqLogo Suggests: cosmoGUI Package: ctc Version: 1.16.0 Depends: amap Package: daMA Version: 1.14.0 Depends: MASS Package: diffGeneAnalysis Version: 1.24.0 Depends: minpack.lm (>= 1.0-4) Package: domainsignatures Version: 1.2.0 Depends: R (>= 2.4.0), KEGG.db, prada, biomaRt, methods Imports: AnnotationDbi Package: dualKS Version: 1.2.0 Depends: R (>= 2.6.0), Biobase (>= 1.15.0), affy, methods Package: ecolitk Version: 1.14.0 Depends: R (>= 2.5), affy, ecoliLeucine, ecolicdf, Biobase Suggests: graph, matchprobes, multtest, vsn Package: edd Version: 1.20.0 Depends: methods, golubEsets, Biobase, class, nnet, xtable Package: edgeR Version: 1.0.4 Depends: R (>= 2.3.0), methods, Biobase Suggests: MASS Package: exonmap Version: 2.0.03 Depends: R (>= 2.0), affy, genefilter, RColorBrewer, RMySQL (>= 0.6-0), DBI, methods Package: explorase Version: 1.6.0 Depends: R (>= 2.6.2) Imports: limma, rggobi, RGtk2 Suggests: cairoDevice Package: externalVector Version: 1.8.0 Depends: R (>= 1.8.0), methods, stats Package: factDesign Version: 1.16.0 Depends: Biobase, affy, stats Package: fbat Version: 1.6.0 Depends: MASS, GeneticsBase Package: fdrame Version: 1.14.0 Depends: tcltk Package: flowClust Version: 1.8.1 Depends: R(>= 2.5.0), methods, mnormt, mclust, ellipse, Biobase, flowCore Package: flowCore Version: 1.8.3 Depends: R (>= 2.7.0), methods, rrcov, feature, Biobase Imports: Biobase, MASS, utils, graph Suggests: flowViz Package: flowQ Version: 1.2.0 Depends: R (>= 2.4.0), outliers, lattice, flowViz, methods Imports: geneplotter, flowCore, flowViz Package: flowUtils Version: 1.2.0 Depends: R (>= 2.2.0), flowCore (>= 1.2.0), methods, XML Imports: flowCore, XML, RUnit Suggests: gatingMLData Package: flowViz Version: 1.6.2 Depends: R (>= 2.7.0), flowCore (>= 1.5.17), RColorBrewer, lattice, latticeExtra,methods Imports: flowCore, graphics, lattice, latticeExtra, geneplotter, MASS, grid Package: gaga Version: 1.2.0 Depends: R (>= 2.5.0), Biobase, coda Package: gaggle Version: 1.10.0 Depends: R (>= 2.3.0), rJava (>= 0.4), graph (>= 1.10.2), RUnit (>= 0.4.17) Package: gcrma Version: 2.14.1 Depends: R (>= 2.6.0), Biobase, affy (>= 1.5.0), matchprobes, splines Suggests: affydata Package: genArise Version: 1.18.0 Depends: R (>= 1.7.1), locfit, tkrplot, xtable, methods Package: geneRecommender Version: 1.14.0 Depends: R (>= 1.8.0), Biobase (>= 1.4.22) Package: genefilter Version: 1.22.0 Depends: methods, Biobase (>= 1.99.10), survival Imports: AnnotationDbi, annotate (>= 1.13.7) Suggests: class, hgu95av2.db, tkWidgets Package: geneplotter Version: 1.20.0 Depends: Biobase, methods, lattice, annotate, graphics Imports: KernSmooth, RColorBrewer, AnnotationDbi, graphics Suggests: hgu95av2.db, hu6800.db, hgu133a.db, fibroEset, Rgraphviz, annotate Package: globaltest Version: 4.12.0 Depends: methods Imports: Biobase, survival, AnnotationDbi, annotate, multtest, graphics Suggests: vsn, golubEsets, KEGG.db, hu6800.db, GOstats, Rgraphviz, GO.db Package: goProfiles Version: 1.4.0 Depends: Biobase, AnnotationDbi, GO.db Suggests: org.Hs.eg.db Package: goTools Version: 1.16.0 Depends: GO.db Suggests: hgu133a.db Package: gpls Version: 1.14.0 Imports: stats Package: graph Version: 1.20.0 Depends: R (>= 2.6.0), methods Imports: tools, cluster, methods Suggests: SparseM (>= 0.36), XML, RBGL Package: hexbin Version: 1.16.0 Depends: R (>= 2.0.1), methods, stats, grid, lattice Suggests: marray, cluster, affy, Biobase Package: hopach Version: 2.2.0 Depends: R (>= 2.6.0), cluster, Biobase, methods Package: hypergraph Version: 1.14.0 Depends: R (>= 2.1.0), methods, graph Package: idiogram Version: 1.18.0 Depends: R (>= 2.0.0), methods, Biobase, annotate, plotrix Suggests: hu6800.db, golubEsets Package: impute Version: 1.14.0 Depends: R (>= 1.7.0) Package: iterativeBMA Version: 1.0.0 Depends: BMA, leaps, Biobase Package: iterativeBMAsurv Version: 1.0.0 Depends: BMA, leaps, survival, splines Package: keggorth Version: 1.4.0 Depends: R (>= 2.5.0), graph, hgu95av2.db, RBGL, ALL Package: lapmix Version: 1.8.0 Depends: R (>= 2.6.0), Biobase Package: limmaGUI Version: 1.18.0 Depends: limma, tcltk Suggests: statmod, sma, R2HTML, xtable, tkrplot Package: limma Version: 2.16.5 Depends: R (>= 2.3.0), methods Suggests: affy, marray, MASS, org.Hs.eg.db, splines, sma, statmod (>= 1.2.2), vsn Package: logicFS Version: 1.12.0 Depends: LogicReg Suggests: genefilter, siggenes Package: logitT Version: 1.0.0 Depends: affy Suggests: SpikeInSubset Package: lumi Version: 1.8.3 Depends: R (>= 2.4.0), annotate, affy, Biobase (>= 1.12.0), mgcv (>= 1.4-0), methods, preprocessCore, RSQLite Suggests: beadarray, limma, vsn, lumiBarnes, lumiHumanAll.db, lumiHumanIDMapping, genefilter, geneplotter, RColorBrewer Package: maCorrPlot Version: 1.12.0 Depends: lattice Package: maDB Version: 1.14.1 Depends: R (>= 2.5.0), Biobase (>= 1.14.0), affy (>= 1.14.0),pgUtils (>= 1.5.0), limma (>= 1.8.0), methods Suggests: geneplotter (>= 1.6.0), annaffy (>= 1.6.2), biomaRt (>= 1.8.2) Package: maSigPro Version: 1.14.0 Depends: R (>= 2.3.1), Biobase Suggests: marray, EMV, limma, Mfuzz Package: maanova Version: 1.12.0 Depends: R (>= 2.5.0) Suggests: qvalue, snow Package: macat Version: 1.16.0 Depends: Biobase, annotate Suggests: hgu95av2, stjudem Package: made4 Version: 1.16.0 Depends: ade4 Suggests: affy,RColorBrewer, gplots,scatterplot3d Package: maigesPack Version: 1.6.0 Depends: R (>= 2.0.0), convert, graph, limma, marray, methods Suggests: amap, annotate, class, e1071, MASS, multtest, OLIN, R2HTML, rgl, som Package: makePlatformDesign Version: 1.6.0 Depends: R (>= 2.6.0), affyio, oligo Package: makecdfenv Version: 1.20.0 Depends: R (>= 2.6.0), methods, Biobase (>= 1.4.1), affy (>= 1.4.0), utils, affyio Package: marray Version: 1.20.0 Depends: R (>= 1.9.0), limma, methods Suggests: tkWidgets Package: matchprobes Version: 1.14.1 Depends: R (>= 2.6.0), Biobase, affy Suggests: hgu95av2cdf, hgu95av2probe, hu6800cdf, hu6800probe Package: mdqc Version: 1.4.0 Depends: R (>= 2.2.1), cluster, MASS Package: metaArray Version: 1.16.0 Depends: MergeMaid Package: miRNApath Version: 1.2.0 Depends: methods,R(>= 2.7.0) Package: microRNA Version: 1.0.0 Depends: matchprobes, Rlibstree Package: minet Version: 1.2.0 Depends: R (>= 2.3.0) Package: multiscan Version: 1.2.0 Depends: R (>= 2.3.0) Imports: Biobase, utils Package: multtest Version: 1.22.0 Depends: R (>= 2.1.0), methods, Biobase Imports: survival Package: nem Version: 2.6.0 Depends: R (>= 2.0), e1071 (>= 1.5), graph (>= 1.10), Rgraphviz (>= 1.10), RBGL (>= 1.8.1), time (>= 1.0), cluster (>= 1.11), bootstrap (>= 1.0-20), RColorBrewer, plotrix Suggests: Biobase (>= 1.10) Package: nnNorm Version: 2.6.0 Depends: R(>= 2.2.0), nnet, marray Package: nudge Version: 1.8.0 Depends: stats Package: occugene Version: 1.2.0 Depends: R (>= 2.0.0) Package: oligoClasses Version: 1.4.0 Depends: R (>= 2.6.0), methods, Biobase Suggests: RSQLite, oligo Package: oligo Version: 1.6.0 Depends: methods, R (>= 2.5.0), Biobase (>= 1.13.58), splines, RSQLite, preprocessCore, AnnotationDbi, affxparser, oligoClasses (>= 1.1.18) Suggests: hapmap100kxba, pd.mapping50k.xba240 Package: oneChannelGUI Version: 1.8.10 Depends: Biobase, affylmGUI, tkWidgets, GOstats, AnnotationDbi Suggests: annotate, genefilter, maSigPro, pamr, pdmclass, Rgraphviz, affy ,annaffy, affyPLM, multtest, ssize, sizepower, siggenes, RankProd, org.Hs.eg.db, org.Mm.eg.db, org.Rn.eg.db, metaArray, biomaRt, GenomeGraphs, AffyCompatible, Biostrings Package: ontoTools Version: 1.20.0 Depends: R (>= 2.4.0), methods, graph, Biobase, AnnotationDbi, SparseM, GO.db, annotate Suggests: combinat, Iyer517, org.Hs.eg.db, KEGG.db Package: pamr Version: 1.40.1 Depends: cluster, survival Package: panp Version: 1.12.0 Depends: affy (>= 1.14.0), R (>= 2.5.0), Biobase (>= 1.14.0) Package: parody Version: 1.0.0 Depends: R (>= 2.5.0), methods, tools, utils Package: pathRender Version: 1.10.0 Depends: graph, Rgraphviz, RColorBrewer, cMAP, AnnotationDbi, methods Suggests: ALL, hgu95av2.db Package: pcaMethods Version: 1.18.0 Depends: MASS, pls, methods Suggests: aroma.light Package: pcot2 Version: 1.10.0 Depends: R (>= 2.0.0), grDevices, Biobase, amap Suggests: multtest, hu6800.db, KEGG.db, mvtnorm Package: pdInfoBuilder Version: 1.6.0 Depends: R (>= 2.6.0), methods, Biobase (>= 1.13.58), RSQLite (>= 0.4-15), affxparser (>= 1.7.2), oligo (>= 1.3.17) Imports: Biobase (>= 1.13.58) Package: pdmclass Version: 1.14.0 Depends: Biobase (>= 1.4.22), R (>= 1.9.0), fibroEset, mda Package: pgUtils Version: 1.14.1 Depends: R (>= 1.8.0), Rdbi (>= 1.0.2), RdbiPgSQL (>= 1.0.2), methods Package: pickgene Version: 1.14.0 Depends: MASS Package: pkgDepTools Version: 1.8.0 Depends: methods, graph, RBGL Imports: graph, RBGL Suggests: Biobase, Rgraphviz, RCurl Package: plgem Version: 1.14.0 Depends: R (>= 2.6.0), Biobase, MASS Package: plier Version: 1.12.0 Depends: R (>= 2.0), affy, methods Package: plw Version: 1.2.0 Depends: MASS, affy, splines Suggests: limma Package: ppiStats Version: 1.8.0 Depends: GO.db, GOstats, org.Sc.sgd.db, graph, Category, ppiData (>= 0.1.6), ScISI (>= 1.13.2), lattice, grid, RColorBrewer, Biobase, AnnotationDbi, methods Suggests: yeastExpData, geneplotter, xtable Package: prada Version: 1.18.0 Depends: R (>= 2.1.0), Biobase, RColorBrewer, grid, methods, rrcov Imports: MASS, KernSmooth, RColorBrewer, geneplotter Suggests: cellHTS, rflowcyt, tcltk Package: preprocessCore Version: 1.4.0 Depends: methods Package: puma Version: 1.8.1 Depends: R (>= 2.6.0), Biobase, affy, graphics, grDevices, methods, stats, utils Suggests: pumadata, affydata, snow, limma, annotate, ROCR Package: quantsmooth Version: 1.8.0 Depends: quantreg, lodplot, grid Package: qvalue Version: 1.16.0 Depends: tcltk Package: rHVDM Version: 1.8.1 Depends: R (>= 2.3), R2HTML (>= 1.5), affy (>= 1.5), minpack.lm (>= 1.0-5), Biobase Package: rama Version: 1.16.0 Depends: R(>= 2.5.0) Package: rbsurv Version: 1.10.0 Depends: R (>= 2.5.0), Biobase, survival Package: reb Version: 1.16.0 Depends: R (>= 2.0), Biobase, idiogram (>= 1.5.3) Package: rflowcyt Version: 1.14.0 Depends: R (>= 2.3.0), survival, xtable, stats, KernSmooth, MASS, grid, methods, hexbin, rfcdmin (>= 0.9.0), fields, lattice, locfit, splancs, prada, xgobi Imports: graphics Package: rsbml Version: 2.0.0 Depends: R (>= 2.6.0), graph, methods, utils Package: rtracklayer Version: 1.2.2 Depends: R (>= 2.7.0), Biobase, methods, RCurl Imports: XML (>= 1.98-0), rJava, IRanges, Biostrings Suggests: humanStemCell, microRNA, genefilter, limma, org.Hs.eg.db Package: safe Version: 2.2.0 Depends: R (>= 2.4.0), SparseM, annotate, Biobase, methods Imports: annotate, survival, Biobase Suggests: GO.db, GOstats, Rgraphviz, multtest, hu6800.db, survival Package: sagenhaft Version: 1.12.0 Depends: R (>= 2.5), SparseM (>= 0.73) Package: seqLogo Version: 1.8.0 Depends: methods, grid Package: sigPathway Version: 1.10.0 Depends: R (>= 2.0.0) Suggests: hgu133a.db (>= 1.10.0), XML (>= 1.6-3), AnnotationDbi (>= 1.3.12) Package: siggenes Version: 1.16.0 Depends: methods, multtest, Biobase, splines Suggests: affy, annotate, genefilter, KernSmooth Package: simpleaffy Version: 2.18.0 Depends: R (>= 2.0.0), affy, genefilter, Biobase, methods, utils, gcrma Imports: methods, utils Package: simulatorAPMS Version: 1.14.0 Depends: graph, apComplex, Rgraphviz, ScISI, ppiStats Package: sizepower Version: 1.12.0 Depends: stats Package: snapCGH Version: 1.10.0 Depends: limma, tilingArray, DNAcopy, GLAD, cluster, methods, aCGH Package: snpMatrix Version: 1.6.1 Depends: R(>= 2.3.0), survival, methods Suggests: hexbin Package: spikeLI Version: 1.10.0 Depends: utils Package: splicegear Version: 1.14.0 Depends: R (>= 2.6.0), methods, utils, grid, Biobase(>= 1.15), XML (>= 0.92-2), annotate Package: splots Version: 1.8.0 Depends: grid Package: spotSegmentation Version: 1.16.0 Depends: R (>= 1.7.0), mclust Package: sscore Version: 1.14.0 Depends: R (>= 1.8.0), affy, affyio Suggests: affydata Package: ssize Version: 1.14.0 Depends: gdata, xtable Package: stam Version: 1.10.0 Depends: R (>= 2.7.0), GO.db (>= 2.1.3), Biobase (>= 1.99.5), pamr (>= 1.37.0), cluster (>= 1.11.10), annaffy (>= 1.11.5), methods (>= 2.7.0), utils (>= 2.7.0) Suggests: golubEsets (>= 1.4.4), hu6800.db (>= 2.1.4) Package: stepNorm Version: 1.14.0 Depends: R (>= 1.8.0), marray, MASS, methods Package: tilingArray Version: 1.20.0 Depends: R (>= 2.6.0), methods, Biobase (>= 1.15.27), affy (>= 1.15.7), RColorBrewer (>= 0.2-3), grid (>= 2.0.0), strucchange (>= 1.3-0), vsn (>= 3.0.11), genefilter (>= 1.15.10), geneplotter (>= 1.15.7), pixmap (>= 0.4-4) Package: timecourse Version: 1.14.0 Depends: R (>= 2.1.1), limma (>= 1.8.6), MASS, Biobase, methods Package: tkWidgets Version: 1.20.0 Depends: R (>= 2.0.0), methods, widgetTools (>= 1.1.7), DynDoc (>= 1.3.0), tools Suggests: Biobase Package: topGO Version: 1.10.1 Depends: R (>= 2.7.0), methods, graph (>= 1.14.0), Biobase (>= 1.99.0), GO.db (>= 2.1.4), AnnotationDbi (>= 1.1.35), SparseM (>= 0.73) Imports: methods, graph (>= 1.14.0), Biobase (>= 1.99.0), SparseM (>= 0.73), AnnotationDbi (>= 1.1.35) Suggests: ALL, hgu95av2.db, genefilter, xtable, multtest, Rgraphviz, hgu133a.db Package: twilight Version: 1.18.0 Depends: R (>= 2.1.0), splines (>= 2.2.0), stats (>= 2.2.0),Biobase(>= 1.12.0) Suggests: golubEsets (>= 1.4.2), vsn (>= 1.7.2) Package: vbmp Version: 1.10.0 Depends: R (>= 2.5) Suggests: Biobase, statmod Package: vsn Version: 3.8.0 Depends: R (>= 2.6.0), methods, lattice, Biobase (>= 1.15.33), affy (>= 1.15.7), limma (>= 2.11.12) Suggests: affydata, hgu95av2cdf, geneplotter Package: weaver Version: 1.8.0 Depends: R (>= 2.5.0), digest, tools, utils, codetools Suggests: codetools Package: webbioc Version: 1.14.0 Depends: R (>= 1.8.0), Biobase, affy, multtest, annaffy, vsn, gcrma, qvalue Package: widgetInvoke Version: 1.13.0 Depends: methods, XML, RGtk Package: widgetTools Version: 1.18.0 Depends: R (>= 2.4.0), methods, utils, tcltk Suggests: Biobase Package: xcms Version: 1.14.1 Depends: R (>= 1.9.0), methods Suggests: faahKO, msdata, multtest, ncdf, rgl, MassSpecWavelet (>= 1.5.2), Rgraphviz Package: xmapbridge Version: 1.0.0 Depends: R (>= 2.0), methods Package: xps Version: 1.2.10 Depends: R (>= 2.5.0), methods Package: yaqcaffy Version: 1.2.0 Depends: simpleaffy, methods, geneplotter Imports: simpleaffy, methods Suggests: MAQCsubsetAFX