extractAffyids         package:oneChannelGUI         R Documentation

_E_x_t_r_a_c_t_i_n_g _p_r_o_b_e _i_d_s _a_s_s_o_c_i_a_t_e_d _t_o _a _s_p_e_c_i_f_i_c _G_e_n_e _O_n_t_o_l_o_g_y _t_e_r_m

_D_e_s_c_r_i_p_t_i_o_n:

     It is possible to identify the affy ids associated to a specific
     GO term using the extractAffyids function.

_U_s_a_g_e:

     extractAffyids()

_D_e_t_a_i_l_s:

     The function asks to the user to select a file containing probe
     set ids separated by carriage return. The file should contain only
     one column and no header. The user is also  asked to select a
     specific GO term. The probe sets associated to the specific GO
     term will be annotated ans saved in a HTML file.

_N_o_t_e:

     For the annotation the annotation library associated to the raw
     data loaded in the  affylmGUI environment is used.

_A_u_t_h_o_r(_s):

     Raffaele A. Calogero

_S_e_e _A_l_s_o:

     GOenrichment, plotGO

