inspecting.one.splice.index  package:oneChannelGUI  R Documentation

_P_l_o_t_t_i_n_g _o_n _t_h_e _p_r_o_f_i_l_e_s _o_f _s_p_l_i_c_e _i_n_d_e_x_e_s _f_o_r _a _t_r_a_n_s_c_r_i_p_t _c_l_u_s_t_e_r _I_D

_D_e_s_c_r_i_p_t_i_o_n:

     This function plots the splice index profiles for one trnascript
     cluster ID

_U_s_a_g_e:

     inspecting.one.splice.index( transcriptID, SpliceIndexDiff, PvalExon)

_A_r_g_u_m_e_n_t_s:

transcriptID: A character string indicating the geatureName of the
          transcript cluster to be evaluate

SpliceIndexDiff: a numerical value indicating the treshold to detect an
          alternative splicing.  It represent the minimal absolute
          difference between the splice indexes measured for the same
          exon under two different experimental conditions

PvalExon: The max p-value obtainable by a t-test done on the splice
          indexes measured for the same exon under two different
          experimental conditions 

_A_u_t_h_o_r(_s):

     Raffaele A Calogero

_S_e_e _A_l_s_o:

     spliceIndex

