\HeaderA{inspecting.one.splice.index}{Plotting on the profiles of splice indexes for a transcript cluster ID}{inspecting.one.splice.index}
\keyword{methods}{inspecting.one.splice.index}
\begin{Description}\relax
This function plots the splice index profiles for one trnascript cluster ID
\end{Description}
\begin{Usage}
\begin{verbatim}
inspecting.one.splice.index( transcriptID, SpliceIndexDiff, PvalExon)
\end{verbatim}
\end{Usage}
\begin{Arguments}
\begin{ldescription}
\item[\code{transcriptID}] A character string indicating the geatureName of the transcript cluster to be evaluate
\item[\code{SpliceIndexDiff}] a numerical value indicating the treshold to detect an alternative splicing. 
It represent the minimal absolute difference between the splice indexes measured for the same exon under two
different experimental conditions
\item[\code{PvalExon}] The max p-value obtainable by a t-test done on the splice indexes measured for the same exon under two
different experimental conditions 
\end{ldescription}
\end{Arguments}
\begin{Author}\relax
Raffaele A Calogero
\end{Author}
\begin{SeeAlso}\relax
spliceIndex
\end{SeeAlso}

