\HeaderA{extractAffyids}{Extracting probe ids associated to a specific Gene Ontology term}{extractAffyids}
\keyword{methods}{extractAffyids}
\begin{Description}\relax
It is possible to identify the affy ids associated to a specific GO term using the
extractAffyids function.
\end{Description}
\begin{Usage}
\begin{verbatim}
extractAffyids()
\end{verbatim}
\end{Usage}
\begin{Details}\relax
The function asks to the user to select a file containing probe set ids separated by
carriage return. The file should contain only one column and no header. The user is also 
asked to select a specific GO term. The probe sets associated to the specific GO term will
be annotated ans saved in a HTML file.
\end{Details}
\begin{Note}\relax
For the annotation the annotation library associated to the raw data loaded in the 
affylmGUI environment is used.
\end{Note}
\begin{Author}\relax
Raffaele A. Calogero
\end{Author}
\begin{SeeAlso}\relax
GOenrichment, plotGO
\end{SeeAlso}

