ParESet-class            package:SNPchip            R Documentation

_C_l_a_s_s "_P_a_r_E_S_e_t"

_D_e_s_c_r_i_p_t_i_o_n:

     A class containing a list of graphical parameters for plotting
     objects extending 'SnpLevelSet'

_O_b_j_e_c_t_s _f_r_o_m _t_h_e _C_l_a_s_s:

     Objects can be created by calls of the form 'new("ParESet",
     layout, col.axis, cex.main, cex.axis, cex.legend, cex, cex.lab,
     pch, col, bg, xaxs, xaxt, yaxs, yaxt, lab, adj, bty, ann,
     useLayout, mar, oma, las, log, ylab, side.ylab, outer.ylab,
     line.ylab, cex.ylab, xlab, outer.xlab, side.xlab, cex.xlab,
     line.xlab, outer.axis, line.axis, main, col.centromere,
     border.centromere, xlim, ylim, one.ylim, add.cytoband,
     outer.cytoband, outer.cytoband.axis, label.cytoband,
     use.chromosome.size, label.chromosome, line.label.chromosome,
     xaxis.side, alternate.xaxis.side, mat, heights, widths, respect,
     firstChromosome, ...)'.

_S_l_o_t_s:


     '_s_n_p_P_a_r': Object of class 'list'

_M_e_t_h_o_d_s:


     _h_m_m_P_r_e_d_i_c_t 'signature(object="ParESet")': Accessor for
          'HmmPredict' instance.  See also 'hmmPredict'

     _i_n_i_t_i_a_l_i_z_e 'signature(.Object = "ParESet")'

     _p_l_o_t_S_n_p 'ParESet, SnpLevelSet':See also 'plotSnp'

     _s_n_p_P_a_r 'signature(object = "ParESet")'

     _s_n_p_P_a_r<- 'signature(object = "ParESet")'

     _s_n_p_s_e_t 'signature(object="ParESet")': Accessor for SNP data
          ('SnpLevelSet' instance).  See 'snpset'.

_A_u_t_h_o_r(_s):

     R. Scharpf

_S_e_e _A_l_s_o:

     'ParSnpCallSet-class', 'ParSnpCopyNumberSet-class',
     'ParSnpSet-class'

_E_x_a_m_p_l_e_s:

     showClass("ParESet")

