SGA                   package:SLGI                   R Documentation

_S_y_s_t_e_m_a_t_i_c _g_e_n_e_t_i_c _a_n_a_l_y_s_i_s _w_i_t_h _o_r_d_e_r_e_d _a_r_r_a_y_s _o_f _y_e_a_s_t _d_e_l_e_t_i_o_n.

_D_e_s_c_r_i_p_t_i_o_n:

     Listed of yeast deletion genes used as array probes in the
     Systematic Genetic Analysis (SGA) of yeast deletion Tong et. al.
     (2001).

_U_s_a_g_e:

            data(SGAraw)
            data(SGA)

_D_e_t_a_i_l_s:

     'SGAraw' is a 'character' vector of length 4672, corresponding to 
     the original yeast deletion genes set on the array. Note that some
     of those  genes correspond to ORFS that have subsequently been
     rejected.

     'SGA' is a 'character' vector of length 4655, corresponding to 
     the updated yeast deletion genes set on the array. The gene names
     have been updated from common gene name or alias to systemantic
     names (last update Feb. 2006).

_S_o_u_r_c_e:

     Table S1 from Tong et al . (2001) online supporting material.
     <URL:
     http://www.sciencemag.org/cgi/content/full/294/5550/2364/DC1>

_R_e_f_e_r_e_n_c_e_s:

     Systematic genetic analysis with ordered arrays of yeast deletion
     mutants, Tong et al, Science. Vol. 294, 2001

_E_x_a_m_p_l_e_s:

      data(SGAraw)
      length(SGAraw)

      if(require("YEAST"))
      updateSGA <- mget(SGAraw, YEASTCOMMON2SYSTEMATIC, ifnotfound = SGAraw)
      

