\HeaderA{plot}{Graphical method to represent the result of the modelSLGI .}{plot}
\aliasA{plot,siResult,missing-method}{plot}{plot,siResult,missing.Rdash.method}
\aliasA{plot,siResult-method}{plot}{plot,siResult.Rdash.method}
\keyword{data}{plot}
\keyword{manip}{plot}
\begin{Description}\relax
a plot method for \code{siResult}.
\end{Description}
\begin{Usage}
\begin{verbatim}
## S4 method for signature 'siResult':
plot(x,...)
\end{verbatim}
\end{Usage}
\begin{Arguments}
\begin{ldescription}
\item[\code{x}] the \code{siResult} object to plot.
\item[\code{...}] general commands to be sent to plot.
\end{ldescription}
\end{Arguments}
\begin{Details}\relax
The plot generated from a \code{siResult} object is a dotplot with the
observed and expected data average of interaction represented in 2
different colors.
\end{Details}
\begin{Author}\relax
N. LeMeur
\end{Author}
\begin{SeeAlso}\relax
\emph{ScISI}
\end{SeeAlso}
\begin{Examples}
\begin{ExampleCode}
data(ScISIC)
data(Atong)
data(SGA)
model <-  modelSLGI(Atong, universe= SGA, interactome=ScISIC,
type="intM", perm=2)
plot(model)
\end{ExampleCode}
\end{Examples}

