\HeaderA{topInteraction}{Extract interacting biological complexes}{topInteraction}
\keyword{data}{topInteraction}
\keyword{manip}{topInteraction}
\begin{Description}\relax
Extract the top X interacting biological complexes.
\end{Description}
\begin{Usage}
\begin{verbatim}topInteraction(data,top=10)\end{verbatim}
\end{Usage}
\begin{Arguments}
\begin{ldescription}
\item[\code{data}] Square matrix of biological complexes that shares one or
more genes(proteins)
\item[\code{top}] Interger that represents the percentage of interacting complexe
\end{ldescription}
\end{Arguments}
\begin{Value}
Data frame of biological complexes that interact. The first two
columns are the cellular organizational units names and the third
column indicates the number of interactions.
\end{Value}
\begin{Author}\relax
N. LeMeur
\end{Author}
\begin{Examples}
\begin{ExampleCode}
data(Atong)
data(ScISIC)
data(SGA)
SLa2 <- gi2Interactome(Atong, ScISIC)
## Search for synthetic lethal interaction
compM <- getInteraction(SLa2, SGA, ScISIC)
top10Interaction<- topInteraction(compM$bwMat,top=10)
\end{ExampleCode}
\end{Examples}

