plot                  package:SLGI                  R Documentation

_G_r_a_p_h_i_c_a_l _m_e_t_h_o_d _t_o _r_e_p_r_e_s_e_n_t _t_h_e _r_e_s_u_l_t _o_f _t_h_e _m_o_d_e_l_S_L_G_I .

_D_e_s_c_r_i_p_t_i_o_n:

     a plot method for 'siResult'.

_U_s_a_g_e:

     ## S4 method for signature 'siResult':
     plot(x,...)

_A_r_g_u_m_e_n_t_s:

       x: the 'siResult' object to plot.

     ...: general commands to be sent to plot.

_D_e_t_a_i_l_s:

     The plot generated from a 'siResult' object is a dotplot with the
     observed and expected data average of interaction represented in 2
     different colors.

_A_u_t_h_o_r(_s):

     N. LeMeur

_S_e_e _A_l_s_o:

     _ScISI_

_E_x_a_m_p_l_e_s:

     data(ScISIC)
     data(Atong)
     data(SGA)
     model <-  modelSLGI(Atong, universe= SGA, interactome=ScISIC,
     type="intM", perm=2)
     plot(model)

