SDL                   package:SLGI                   R Documentation

_T_h_e _A_s_s_o_c_i_a_t_i_o_n _m_a_t_r_i_x _f_o_r _t_h_e _s_y_n_t_h_e_t_i_c _d_o_s_a_g_e
_l_e_t_h_a_l _s_c_r_e_e_n_s _i_n _Y_e_a_s_t.

_D_e_s_c_r_i_p_t_i_o_n:

     The data reported in Table 6 of the supplementary data of Measday
     et. al.

_U_s_a_g_e:

            data(SDL)
            data(SLchr)

_F_o_r_m_a_t:

     'SDL' is a matrix with 141 rows and 9 columns. The columns
     represent  3 genes at each of 3 temperatures (16, 25, 37 Celsius).
     The gene names and temperatures are  combined in the column names.
     The row names are yeast standard names. The values are 'NA', no
     effect, 'SDS' for synthetic dosage sick, 'SL' for synthetic lethal
     and 'SDL' for synthetic dosage lethal.

     'SLchr' is a matrix with 84 rows and 14 columns. Each column
     represents a query strain which was tested against the genome wide
     set of deletion strains. The entries can be 'NA' for no effect,
     'SL' for synthetic lethal and 'SS' for synthetic sick.

_S_o_u_r_c_e:

     Supplementary Table 6 of the reference given below.

_R_e_f_e_r_e_n_c_e_s:

     Systematic yeast synthetic lethal and synthetic dosage lethal
     screens identify genes required for chromosome segregation.
     Measday et al, PNAS, 2005, 13956-13961.

_E_x_a_m_p_l_e_s:

     data(SDL)
     table(SDL)

