TFmat                  package:SLGI                  R Documentation

_T_r_a_n_s_c_r_i_p_t_i_o_n _F_a_c_t_o_r _B_i_n_d_i_n_g _A_f_f_i_n_i_t_i_e_s

_D_e_s_c_r_i_p_t_i_o_n:

     The data are from Lee et al, the rows of the matrix represent
     genes in S. cerevisiae, the columns known transcription factor.
     The value in each entry represents the p-value, as reported by Lee
     et al, for the transcription factor (TF) binding upstream of the
     gene.

_U_s_a_g_e:

     data(TFmat)

_F_o_r_m_a_t:

     'TFmat' is a matrix, rows represent genes, columns transcription
     factors and the elements are p-values representing some notion of
     the likelihood that the transcription factor binds up stream of
     the gene.

_A_u_t_h_o_r(_s):

     Z. Jiang

_S_o_u_r_c_e:

     Supplementary material from <URL:
     http://web.wi.mit.edu/young/regulator_network/>

_R_e_f_e_r_e_n_c_e_s:

     Transcriptional Regulatory Networks in Saccharomyces cerevisiae,
     Lee et al. Science 298:799-804 (2002).

_E_x_a_m_p_l_e_s:

     data(TFmat)

