SDL {SLGI} | R Documentation

## The Association matrix for the synthetic dosage lethal screens in Yeast.

### Description

The data reported in Table 6 of the supplementary data of Measday et. al.

### Usage

           data(SDL)
           data(SLchr)

### Format

`SDL` is a matrix with 141 rows and 9 columns. The columns represent 3 genes at each of 3 temperatures (16, 25, 37 Celsius). The gene names and temperatures are combined in the column names. The row names are yeast standard names. The values are `NA`, no effect, `SDS` for synthetic dosage sick, `SL` for synthetic lethal and `SDL` for synthetic dosage lethal.

`SLchr` is a matrix with 84 rows and 14 columns. Each column represents a query strain which was tested against the genome wide set of deletion strains. The entries can be `NA` for no effect, `SL` for synthetic lethal and `SS` for synthetic sick.

### Source

Supplementary Table 6 of the reference given below.

### References

Systematic yeast synthetic lethal and synthetic dosage lethal screens identify genes required for chromosome segregation. Measday et al, PNAS, 2005, 13956-13961.

### Examples

    data(SDL)
    table(SDL)

[Package SLGI version 1.2.0 Index]