\HeaderA{LD-class}{Class "LD" ~~~}{LD.Rdash.class}
\aliasA{head,LD-method}{LD-class}{head,LD.Rdash.method}
\aliasA{html,LD-method}{LD-class}{html,LD.Rdash.method}
\aliasA{latex,LD-method}{LD-class}{latex,LD.Rdash.method}
\aliasA{left,LD-method}{LD-class}{left,LD.Rdash.method}
\aliasA{plot,LD-method}{LD-class}{plot,LD.Rdash.method}
\aliasA{right,LD-method}{LD-class}{right,LD.Rdash.method}
\aliasA{show,LD-method}{LD-class}{show,LD.Rdash.method}
\aliasA{tail,LD-method}{LD-class}{tail,LD.Rdash.method}
\keyword{classes}{LD-class}
\begin{Description}\relax
~~ A concise (1-5 lines) description of what the class is.  ~~
\end{Description}
\begin{Section}{Objects from the Class}
Objects can be created by calls of the form \code{new("LD", ...)}.
~~ describe objects here ~~
\end{Section}
\begin{Section}{Slots}
\describe{
\item[\code{call}:] Function call used to generate this object.
\item[\code{D}:] Linkage disequilibrium estimate
\item[\code{D'}:] Scaled linkage disequilibrium estimate 
\item[\code{r}:] Correlation coefficient
\item[\code{R\textasciicircum{}2}:] squared correlation coefficient
\item[\code{n}:] Number of observations
\item[\code{X\textasciicircum{}2}:] Chi-square statistic for linkage
equilibrium (i.e., D=D'=corr=0)
\item[\code{P-value}:] Chi-square p-value for marker independence
\item[\code{LOD}:] LOD scores
}
\end{Section}
\begin{Section}{Methods}
\describe{
\item[head] \code{signature(x = "LD")}: ... 
\item[html] \code{signature(x = "LD")}: ... 
\item[latex] \code{signature(x = "LD")}: ... 
\item[left] \code{signature(x = "LD")}: ... 
\item[plot] \code{signature(x = "LD")}: ... 
\item[right] \code{signature(x = "LD")}: ... 
\item[show] \code{signature(object = "LD")}: ... 
\item[tail] \code{signature(x = "LD")}: ... 
}
\end{Section}
\begin{Note}\relax
~~further notes~~
\end{Note}
\begin{Author}\relax
Gregory R. Warnes \email{warnes@bst.rochester.edu} and
Nitin Jain \email{nitin.jain@pfizer.com}
\end{Author}
\begin{Examples}
\begin{ExampleCode}
##---- Should be DIRECTLY executable !! ----
\end{ExampleCode}
\end{Examples}

