LDband-class          package:GeneticsBase          R Documentation

_C_l_a_s_s "_L_D_b_a_n_d" ~~~

_D_e_s_c_r_i_p_t_i_o_n:

     ~~ A concise (1-5 lines) description of what the class is.  ~~

_O_b_j_e_c_t_s _f_r_o_m _t_h_e _C_l_a_s_s:

     Objects can be created by calls of the form 'new("LDband", ...)'.
     ~~ describe objects here ~~

_S_l_o_t_s:


     '_c_a_l_l': Function call used to generate this object.

     '_D': Linkage disequilibrium estimate

     '_D'': Scaled linkage disequilibrium estimate 

     '_r': Correlation coefficient

     '_R^_2': squared correlation coefficient

     '_n': Number of observations

     '_X^_2': Chi-square statistic for linkage equilibrium (i.e.,
          D=D'=corr=0)

     '_P-_v_a_l_u_e': Chi-square p-value for marker independence

     '_L_O_D': LOD scores

_M_e_t_h_o_d_s:


     _h_e_a_d 'signature(x = "LDband")': ... 

     _l_e_f_t 'signature(x = "LDband")': ... 

     _r_i_g_h_t 'signature(x = "LDband")': ... 

     _s_h_o_w 'signature(object = "LDband")': ... 

     _t_a_i_l 'signature(x = "LDband")': ... 

_N_o_t_e:

     ~~further notes~~

_A_u_t_h_o_r(_s):

     Gregory R. Warnes warnes@bst.rochester.edu and Nitin Jain
     nitin.jain@pfizer.com

_E_x_a_m_p_l_e_s:

     ##---- Should be DIRECTLY executable !! ----

