boxplot.dev               package:xps               R Documentation

_B_o_x _P_l_o_t_s _f_o_r _D_e_v_i_c_e

_D_e_s_c_r_i_p_t_i_o_n:

     Produce box-and-whisker plot(s) of the samples for the selected
     device.

_U_s_a_g_e:

     boxplot.dev(x, which = "", size = 0, transfo = log2, range = 0, names = "namepart", mar = c(10, 5, 4, 1), las = 2, dev = "screen", outfile = "BoxPlot", w = 800, h = 540, ...)

_A_r_g_u_m_e_n_t_s:

       x: object of class 'DataTreeSet' or 'ExprTreeSet'.

   which: type of probes to be used, for details see 'validData'.

    size: length of sequence to be generated as subset.

 transfo: a valid function to transform the data, usually 'log2', or 0.

   range: determines how far the plot whiskers extend out from the box.

   names: optional vector of sample names.

     mar: plot margin.

     las: style of axis labels.

     dev: graphics device to plot to, i.e. one of "screen",
          "jpeg","png", "pdf" or "ps".

 outfile: the name of the output file.

       w: the width of the device in pixels.

       h: the height of the device in pixels.

     ...: optional arguments to be passed to 'boxplot'.

_D_e_t_a_i_l_s:

     Produces a boxplot for slot 'data' for an object of class
     'DataTreeSet' or 'ExprTreeSet' for the selected graphics device.

_N_o_t_e:

     For a 'DataTreeSet' object, data must first be attached using
     method  'attachInten'.

_A_u_t_h_o_r(_s):

     Christian Stratowa

_S_e_e _A_l_s_o:

     'boxplot'

