\HeaderA{boxplot.dev}{Box Plots for Device}{boxplot.dev}
\keyword{device}{boxplot.dev}
\begin{Description}\relax
Produce box-and-whisker plot(s) of the samples for the selected device.
\end{Description}
\begin{Usage}
\begin{verbatim}
boxplot.dev(x, which = "", size = 0, transfo = log2, range = 0, names = "namepart", mar = c(10, 5, 4, 1), las = 2, dev = "screen", outfile = "BoxPlot", w = 800, h = 540, ...)
\end{verbatim}
\end{Usage}
\begin{Arguments}
\begin{ldescription}
\item[\code{x}] object of class \code{\LinkA{DataTreeSet}{DataTreeSet}} or \code{\LinkA{ExprTreeSet}{ExprTreeSet}}.
\item[\code{which}] type of probes to be used, for details see \code{\LinkA{validData}{validData}}.
\item[\code{size}] length of sequence to be generated as subset.
\item[\code{transfo}] a valid function to transform the data, usually \code{log2}, or 0.
\item[\code{range}] determines how far the plot whiskers extend out from the box.
\item[\code{names}] optional vector of sample names.
\item[\code{mar}] plot margin.
\item[\code{las}] style of axis labels.
\item[\code{dev}] graphics device to plot to, i.e. one of \dQuote{screen}, \dQuote{jpeg},\dQuote{png},
\dQuote{pdf} or \dQuote{ps}.
\item[\code{outfile}] the name of the output file.
\item[\code{w}] the width of the device in pixels.
\item[\code{h}] the height of the device in pixels.
\item[\code{...}] optional arguments to be passed to \code{boxplot}.
\end{ldescription}
\end{Arguments}
\begin{Details}\relax
Produces a boxplot for slot \code{data} for an object of class \code{\LinkA{DataTreeSet}{DataTreeSet}}
or \code{\LinkA{ExprTreeSet}{ExprTreeSet}} for the selected graphics device.
\end{Details}
\begin{Note}\relax
For a \code{\LinkA{DataTreeSet}{DataTreeSet}} object, data must first be attached using method 
\code{\LinkA{attachInten}{attachInten}}.
\end{Note}
\begin{Author}\relax
Christian Stratowa
\end{Author}
\begin{SeeAlso}\relax
\code{\LinkA{boxplot}{boxplot}}
\end{SeeAlso}

