\HeaderA{calculateBreakpoints}{Calculate breakpoints for altered states from the prediction
matrix}{calculateBreakpoints}
\keyword{manip}{calculateBreakpoints}
\keyword{methods}{calculateBreakpoints}
\begin{Description}\relax
Wrapper for findBreaks
\end{Description}
\begin{Usage}
\begin{verbatim}
calculateBreakpoints(object, ...)
\end{verbatim}
\end{Usage}
\begin{Arguments}
\begin{ldescription}
\item[\code{object}] Object of class \code{HmmPredict}
\item[\code{...}] Not implemented
\end{ldescription}
\end{Arguments}
\begin{Details}\relax
Returns a matrix with information on size of region (Mb), predicted state,
number of SNPs in region, chromosome number, and position.
\end{Details}
\begin{Value}
A matrix
\end{Value}
\begin{Author}\relax
R. Scharpf
\end{Author}
\begin{SeeAlso}\relax
\code{\LinkA{findBreaks}{findBreaks}}
\end{SeeAlso}

