\HeaderA{HmmOptions-methods}{Accessors and replacement methods for HmmOptions}{HmmOptions.Rdash.methods}
\aliasA{copyNumber.location}{HmmOptions-methods}{copyNumber.location}
\aliasA{copyNumber.location<\Rdash}{HmmOptions-methods}{copyNumber.location<.Rdash.}
\aliasA{probHomCall}{HmmOptions-methods}{probHomCall}
\aliasA{probHomCall<\Rdash}{HmmOptions-methods}{probHomCall<.Rdash.}
\aliasA{snpset}{HmmOptions-methods}{snpset}
\aliasA{snpset<\Rdash}{HmmOptions-methods}{snpset<.Rdash.}
\aliasA{term5}{HmmOptions-methods}{term5}
\aliasA{term5<\Rdash}{HmmOptions-methods}{term5<.Rdash.}
\keyword{methods}{HmmOptions-methods}
\begin{Description}\relax
Accessors and replacement methods for HmmOptions objects
\end{Description}
\begin{Usage}
\begin{verbatim}

        copyNumber.location(object)
        copyNumber.location(object) <- value    
        probHomCall(object)
        probHomCall(object) <- value
        snpset(object)
        snpset(object) <- value
        term5(object)
        term5(object) <- value
\end{verbatim}
\end{Usage}
\begin{Arguments}
\begin{ldescription}
\item[\code{object}] \code{HmmOptions} instance
\item[\code{value}] see the signature of the corresponding methods
\end{ldescription}
\end{Arguments}
\begin{Value}
copyNumber.location, probHomCall and term5 each return numeric vectors.


snpset returns an instance of \code{SnpLevelSet}
\end{Value}
\begin{SeeAlso}\relax
\code{\LinkA{HmmOptions-class}{HmmOptions.Rdash.class}}
\end{SeeAlso}

