psimi25Complex-class         package:RpsiXML         R Documentation

_C_l_a_s_s "_p_s_i_m_i_2_5_C_o_m_p_l_e_x"

_D_e_s_c_r_i_p_t_i_o_n:

     A class representing complex data

_O_b_j_e_c_t_s _f_r_o_m _t_h_e _C_l_a_s_s:

     Objects can be created by calls of 'parsePsimi25Complex'

_S_l_o_t_s:


     '_s_o_u_r_c_e_D_b': Object of class '"character"', short label of the
          source database

     '_s_o_u_r_c_e_I_d': Object of class '"character"', complex ID of the
          source database 

     '_s_h_o_r_t_L_a_b_e_l': Object of class '"character"', short label of the
          complex

     '_f_u_l_l_N_a_m_e': Object of class '"character"', full name of the
          complex

     '_o_r_g_a_n_i_s_m_N_a_m_e': Object of class '"character"', orgnism name

     '_t_a_x_I_d': Object of class '"character"', taxonomy ID

     '_m_e_m_b_e_r_s': Object of class '"data.frame"', members (UniProt ID if
          available)

     '_a_t_t_r_i_b_u_t_e_s': Object of class '"character"', attributes of the
          complex 

_M_e_t_h_o_d_s:


     _s_h_o_w 'signature(object = "psimi25Complex")': shows information of
          the complex 

     _s_o_u_r_c_e_D_b 'signature(x = "psimi25Complex")': returns source
          database 

     _s_o_u_r_c_e_I_d 'signature(x = "psimi25Complex")': returns source ID 

_A_u_t_h_o_r(_s):

     Jitao David Zhang <j.zhang@dkfz.de>, Tony Chiang
     <tchiang@ebi.ac.uk>

_S_e_e _A_l_s_o:

     'parsePsimi25Complex'

_E_x_a_m_p_l_e_s:

     showClass("psimi25Complex")

