taxId                package:RpsiXML                R Documentation

_T_h_e _t_a_x_o_n_o_m_y _I_D _o_f _t_h_e _g_i_v_e_n _p_a_r_a_m_e_t_e_r

_D_e_s_c_r_i_p_t_i_o_n:

     Returns the taxonomy ID of the object

_U_s_a_g_e:

     taxId(x)

_A_r_g_u_m_e_n_t_s:

       x: An object of 'psimi25InteractionEntry-class' or
          'psimi25Complex-class'

_V_a_l_u_e:

     A character string of taxIDs

_A_u_t_h_o_r(_s):

     Jitao David Zhang <j.zhang@dkfz.de>, Tony Chiang
     <tchiang@ebi.ac.uk>

_R_e_f_e_r_e_n_c_e_s:

     PSI-MI 2.5 XML data exchange format, <URL:
     http://www.psidev.info/index.php?q=node/60>

_S_e_e _A_l_s_o:

     'S4CLASSpsimi25InteractionEntry-class'

_E_x_a_m_p_l_e_s:

     xmlDir <- system.file("/extdata/psi25files",package="RpsiXML")

     hprdxml <- file.path(xmlDir, "hprd_200709_test.xml")
     hprdSet <- parsePsimi25Interaction(hprdxml, HPRD.PSIMI25)

     taxId(hprdSet)

