psimi25Interactor-class       package:RpsiXML       R Documentation

_A _c_l_a_s_s _r_e_p_r_e_s_e_n_t_i_n_g _i_n_t_e_r_a_c_t_o_r _f_r_o_m _P_S_I-_M_I _2._5 _X_M_L _f_i_l_e_s

_D_e_s_c_r_i_p_t_i_o_n:

     A class representing interactor from PSI-MI 2.5 XML files

_S_l_o_t_s:


     '_s_o_u_r_c_e_D_b': Object of class '"character"', source database

     '_s_o_u_r_c_e_I_d': Object of class '"character"', ID of the source
          database 

     '_s_h_o_r_t_L_a_b_e_l': Object of class '"character"', short label of the
          interactor, if not available the slot will be filled with
          "fullName" node of the file

     '_u_n_i_p_r_o_t_I_d': Object of class '"character"', UniProt ID of the
          interactor

     '_o_r_g_a_n_i_s_m_N_a_m_e': Object of class '"character"', the unique name of
          the organism name 

     '_t_a_x_I_d': Object of class '"character"', the NCBI taxonomy ID

_M_e_t_h_o_d_s:

_s_h_o_w 'signature(x = "psimi25Interactor")': a print method

_s_o_u_r_c_e_D_b 'signature(x = "psimi25Interactor")': finds out source
     database

_s_o_u_r_c_e_I_d 'signature(x = "psimi25Interactor")': returns ID of the source
     database 

_A_u_t_h_o_r(_s):

     Jitao David Zhang <j.zhang@dkfz.de>

_S_e_e _A_l_s_o:

     'parseInteractor'

_E_x_a_m_p_l_e_s:

     showClass("psimi25Interactor")

