checkerboard |
Checkerboard plot for Global Test |
exampleX |
Example (simulated) expression data for package
"globaltest". |
exampleY |
Example (simulated) clinical variable for package "globaltest". |
geneplot |
Gene Plot for Global Test |
globaltest |
Global Test |
gt.barplot-class |
Class "gt.barplot" for results of the functions geneplot and sampleplot |
gt.result-class |
Class "gt.result" for results of the function globaltest |
hist,gt.result-method |
Class "gt.result" for results of the function globaltest |
length,gt.barplot-method |
Class "gt.barplot" for results of the functions geneplot and sampleplot |
length,gt.result-method |
Class "gt.result" for results of the function globaltest |
names,gt.barplot-method |
Class "gt.barplot" for results of the functions geneplot and sampleplot |
names,gt.result-method |
Class "gt.result" for results of the function globaltest |
names<-,gt.result-method |
Class "gt.result" for results of the function globaltest |
p.value |
Class "gt.result" for results of the function globaltest |
p.value,gt.result-method |
Class "gt.result" for results of the function globaltest |
permutations |
Permutations version of the Global Test |
plot,gt.barplot-method |
Class "gt.barplot" for results of the functions geneplot and sampleplot |
regressionplot |
Regression Plot for Global Test |
result |
Class "gt.result" for results of the function globaltest |
result,gt.barplot-method |
Class "gt.barplot" for results of the functions geneplot and sampleplot |
result,gt.result-method |
Class "gt.result" for results of the function globaltest |
sampleplot |
Sample Plot for Global Test |
sampling |
Sampling random 'pathways' for the Global Test |
scale,gt.barplot-method |
Class "gt.barplot" for results of the functions geneplot and sampleplot |
show,gt.barplot-method |
Class "gt.barplot" for results of the functions geneplot and sampleplot |
show,gt.result-method |
Class "gt.result" for results of the function globaltest |
z.score |
Class "gt.barplot" for results of the functions geneplot and sampleplot |
z.score,gt.barplot-method |
Class "gt.barplot" for results of the functions geneplot and sampleplot |
[,gt.barplot-method |
Class "gt.barplot" for results of the functions geneplot and sampleplot |
[,gt.result-method |
Class "gt.result" for results of the function globaltest |