panel.superpose.correlogram {ape}R Documentation

Lattice panel used in 'plot.correlogramList'.

Description

This a slightly modified version of the panel.superpose class to allow the use of different characters in a group line. Only two characters are used: filled circle for significant autocorrelation, and open circle for non significant ones. The level of significance and all p-values are passed as arguments.

Usage

panel.superpose.correlogram(x, y = NULL, subscripts, groups,
     panel.groups = "panel.xyplot",
     col, col.line = superpose.line$col,
     col.symbol = superpose.symbol$col,
     pch = superpose.symbol$pch,
     p.values = NULL, test.level = 0.05,
     cex = superpose.symbol$cex,
     font = superpose.symbol$font,
     fontface = superpose.symbol$fontface,
     fontfamily = superpose.symbol$fontfamily,
     lty = superpose.line$lty,
     lwd = superpose.line$lwd, ...)

Arguments

x coordinates of the points to be displayed.
y (optional) another series of coordinates of the points to be displayed.
subscripts subscripts giving indices in original data frame.
groups a grouping variable.
panel.groups panel function to be used for each group.
col colors of the plotting symbols or the lines.
col.line colors of the lines.
col.symbol colors of the plotting symbols.
pch the type of plotting symbols.
p.values the p-values for each point. If NULL, then act as the panel.superpose class and use the pch argument.
test.level the level of significance to consider.
cex character expansion coefficient.
font font for the text.
fontface font face.
fontfamily font family.
lty type of lines.
lwd line width.
... other arguments passed to panel.superpose.

Details

This class is used in plot.correlogramList.

Author(s)

Julien Dutheil julien.dutheil@uni-montp2.fr

See Also

panel.superpose, plot.correlogramList


[Package ape version 1.7 Index]