rtest.between {ade4}R Documentation

Monte-Carlo Test on the between-groups inertia percentage (in R).

Description

Performs a Monte-Carlo test on the between-groups inertia percentage.

Usage

rtest.between(xtest, nrepet = 99, ...)

Arguments

xtest an object of class between
nrepet the number of permutations
... further arguments passed to or from other methods

Value

a list of the class rtest

Author(s)

Daniel Chessel chessel@biomserv.univ-lyon1.fr

References

Romesburg, H. C. (1985) Exploring, confirming and randomization tests. Computers and Geosciences, 11, 19–37.

Examples

data(meaudret)
pca1 <- dudi.pca(meaudret$mil, scan = FALSE, nf = 3)
rand1 <- rtest(between(pca1, meaudret$plan$dat, scan = FALSE), 99)
rand1
plot(rand1, main = "Monte-Carlo test")

[Package ade4 version 1.4-0 Index]