DNAcopy-internal {DNAcopy} | R Documentation |
Internal functions of package DNAcopy.
changepoints(genomdat, data.type = "logratio", alpha = 0.01, nperm = 10000, window.size = NULL, overlap = 0.25, trimmed.SD = NULL, undo.splits = "none", undo.prune = 0.05, undo.SD = 3, verbose = 1) changepoints.prune(genomdat, lseg, change.cutoff=0.05) changepoints.sdundo(genomdat, lseg, trimmed.SD, change.SD=3) trimmed.variance(genomdat, trim=0.025) inflfact(trim)
These are not to be called directly by the user