positiveCounts {twoddpcr}R Documentation

Get a vector of droplet positive and negative counts.

Description

Take a vector of classes and return a vector of positive and negative counts that is compatible with ddPCR analysis.

Usage

positiveCounts(cl)

Arguments

cl

A vector of classes that correspond to droplet amplitude data. The vector should only contain the values "PP", "PN", "NP" or "NN".

Value

A vector corresponding to "PP", "PN", "NP" and "NN".

Author(s)

Anthony Chiu, anthony.chiu@cruk.manchester.ac.uk

Examples

## Take a data frame and make it into the right format.
aWell <- KRASdata[["E03"]]
aWell$Cluster <- relabelClasses(aWell, classCol="Cluster")

## Count the number of droplets in each cluster.
positiveCounts(aWell$Cluster)


[Package twoddpcr version 1.8.0 Index]