kmers.enrichment {transite} | R Documentation |
This data frame with k-mer enrichment data (as produced by
runKmerTSMA
) is used in a code example for k-mer volcano plot
function drawVolcanoPlot
.
kmers.enrichment
A data frame with the following columns:
kmer | contains all hexamers (AAAAAA to UUUUUU) |
foreground.count | absolute k-mer frequency in foreground set |
background.count | absolute k-mer frequency in background set |
enrichment | enrichment of k-mer in foreground relative to background |
p.value | associated p-value of enrichment |
adj.p.value | multiple testing corrected p-value |