rcpp_naive {srnadiff}R Documentation

Compute naive method.

Description

Compute naive method.

Usage

rcpp_naive(lengths, values, chromosomeSizes, depth, distance, size)

Arguments

lengths

the sizes of the RLEs (one list per chromosome)

values

the values of the RLEs (one list per chromosome)

chromosomeSizes

the sizes of the chromosomes

depth

minimum number of reads per position

distance

threshold to merge consecutive regions

size

minimum region size

Value

the unique counts


[Package srnadiff version 1.4.0 Index]