sampleClassifier-package {sampleClassifier} | R Documentation |
The package is designed to classify samples from microarray and RNA-seq gene expression datasets.
Package: | sampleClassifier |
Type: | Package |
Version: | 1.0.0 |
License: | GPL-3 |
Khadija El Amrani Maintainer: Khadija El Amrani <khadija.el-amrani@charite.de>
## Not run: library(sampleClassifierData) data("se_micro_refmat") micro_refmat <- assay(se_micro_refmat) data("se_micro_testmat") micro_testmat <- assay(se_micro_testmat) res1.list <- classifyProfile(ref_matrix=micro_refmat, query_mat=micro_testmat, chip1="hgu133plus2",chip2="hgu133a", write2File=FALSE) res1.list ## End(Not run)