identPWsofTFs {pwOmics}R Documentation

Identification of pathways containing the transcription factors identified in upstream analysis

Description

Identification of pathways containing the transcription factors identified in upstream analysis

Usage

identPWsofTFs(genelists, tps_TFs)

Arguments

genelists

data.table as read/loaded by loadGenelist function.

tps_TFs

data.table of upstream transcription factors as returned from identTFs function.

Value

list with first element being a pathway list and second being a pathway dataframe of pathways including the TFs of the specified timepoint.


[Package pwOmics version 1.16.0 Index]