identTFTGsinPWs {pwOmics} | R Documentation |
This function identifies the TFs in the pathway genes and determines their target genes on basis of the given (chosen) TF-target database(s).
identTFTGsinPWs(data_omics, temp_genelist)
data_omics |
OmicsData object. |
temp_genelist |
dataframe of unique gene IDs in PWs. |
list with first element being a genelist of the pathways and second being a target gene list of TFs.