otu_table-class {phyloseq} | R Documentation |
Because orientation of these tables can vary by method, the orientation is
defined explicitly in the taxa_are_rows
slot (a logical).
The otu_table
class inherits the matrix
class to store
abundance values.
Various standard subset and assignment nomenclature has been extended to apply
to the otu_table
class, including square-bracket, t
, etc.
A single logical specifying the orientation of the abundance table.
This slot is inherited from the matrix
class.