counts,Maser-method {maser} | R Documentation |
Retrieve raw read counts values from a maser object.
## S4 method for signature 'Maser' counts(object, type = c("A3SS", "A5SS", "SE", "RI", "MXE"))
object |
a maser object. |
type |
a character indicating the splice type. Possible values
are |
a matrix.
path <- system.file("extdata", file.path("MATS_output"), package = "maser") hypoxia <- maser(path, c("Hypoxia 0h", "Hypoxia 24h")) head(counts(hypoxia, "SE"))