genesToBarcodes {maftools} | R Documentation |
Extracts Tumor Sample Barcodes where the given genes are mutated.
genesToBarcodes(maf, genes = NULL, justNames = FALSE)
maf |
|
genes |
Hogo_Symbol for which sample names to be extracted. |
justNames |
if TRUE, just returns samples names instead of summarized tables. |
list of data.table
s with samples in which given genes are mutated.
laml.maf <- system.file("extdata", "tcga_laml.maf.gz", package = "maftools") laml <- read.maf(maf = laml.maf) genesToBarcodes(maf = laml, genes = 'DNMT3A')