exportTSS {icetea} | R Documentation |
Export the detected TSS from CapSet object as .bed files
exportTSS(CSobject, outfile_prefix, pergroup = FALSE, merged = TRUE) ## S4 method for signature 'CapSet' exportTSS(CSobject, outfile_prefix, pergroup = FALSE, merged = TRUE)
CSobject |
The modified CapSet object after running |
outfile_prefix |
Prefix (with path) for output .bed files |
pergroup |
If TRUE, write output per group of samples |
merged |
If TRUE, write merged bed file (union of all groups) |
.bed file(s) containing detected TSS.
# load a previously saved CapSet object cs <- exampleCSobject() # export tss exportTSS(cs, merged = TRUE, outfile_prefix = "testTSS")