plot_scatter {iCOBRA} | R Documentation |
Plot scatter plots, indicating the relationship between observed values and a continuous truth.
plot_scatter(cobraplot, title = "", stripsize = 10, titlecol = "black", pointsize = 3, doflip = FALSE, dolog = FALSE)
cobraplot |
A |
title |
A character string giving the title of the plot. |
stripsize |
A numeric value giving the size of the strip text, when the results are stratified by an annotation. |
titlecol |
A character string giving the color of the title. |
pointsize |
A numeric value giving the size of the plot characters. |
doflip |
A logical indicating whether to flip the axes when results are
stratified by an annotation. By default ( |
dolog |
A logical indicating whether to log10-transform values before plotting. |
A ggplot object
Charlotte Soneson
data(cobradata_example) cobraperf <- calculate_performance(cobradata_example, cont_truth = "logFC", aspects = "scatter") cobraplot <- prepare_data_for_plot(cobraperf, colorscheme = "Dark2", incltruth = TRUE) plot_scatter(cobraplot)