download_msigdb {hypeR} | R Documentation |
Download all gene sets from msigdb for a given species
download_msigdb(species = "Homo sapiens", output_dir = NULL)
species |
A species to determine gene symbols (refer to ?msigdbr::msigdbr for avilable species) |
output_dir |
A directory path where gene sets are downloaded instead of to the package location |
A list containing the output directory and version number of gene sets
msigdb_info <- download_msigdb()