download_gsets {hypeR}R Documentation

Fetch a gene sets from msigdb

Description

Fetch a gene sets from msigdb

Usage

download_gsets(species = "Homo sapiens", category, subcategory)

Arguments

species

A species to determine gene symbols (refer to ?msigdbr::msigdbr for avilable species)

category

Gene set category (refer to ?msigdbr::msigdbr for avilable categories)

subcategory

Gene set subcategory (refer to ?msigdbr::msigdbr for avilable subcategories)

Value

A list of gene sets

Examples

HALLMARK <- download_gsets("Homo sapiens", "H", "")


[Package hypeR version 1.00.0 Index]