annotate_paths {hipathia} | R Documentation |
Annotates functions from a database to each pathway
annotate_paths(metaginfo, dbannot)
metaginfo |
Pathways object |
dbannot |
Either a string indicating which precomputed annotation to use ("uniprot" for Uniprot Keywords or "GO" for Gene Ontology terms), or a dataframe with the annotation of the genes to the functions. First column are gene symbols, second column the functions. |
Object of annotations from pathways to functions
#@examples #pathways <- load_pathways(species = "hsa", pathways_list = c("hsa03320", #"hsa04012")) #annotate_paths(pathways, "GO")
#@export