getSubNetwork-methods {geNetClassifier} | R Documentation |
Returns the sub-network formed by the given genes.
getSubNetwork(network, genes, showWarnings=TRUE)
network |
GenesNetwork or GenesNetwork list containing the whole network. |
genes |
GenesRanking or character vector. Genes in the new network. |
showWarnings |
Logical. If true, shows warnings if the given genes are not in the network. |
A GenesNetwork
or list of networks between the given genes.
Main package function and classifier training:
geNetClassifier
This method's class (GenesNetwork
) help page.
data(leukemiasClassifier) clGenesSubNet <- getSubNetwork(leukemiasClassifier@genesNetwork, leukemiasClassifier@classificationGenes) getSubNetwork(leukemiasClassifier@genesNetwork, getTopRanking(leukemiasClassifier@genesRanking, numGenesClass=30))