cqnplot {cqn} | R Documentation |
This function plots the estimated systematic effect which are removed suring CQN normalization.
cqnplot(x, n = 1, col = "grey60", ylab = "QR fit", xlab = "", type = "l", lty = 1, ...)
x |
The result of a call to |
n |
Which systematic effect is plotted. |
col |
A vector of colors, as in |
ylab |
y-label as in |
xlab |
x-label as in |
type |
type, as in |
lty |
line type, as in |
... |
These arguments are passed to |
This function is invoked for its side effect.
Kasper Daniel Hansen
data(montgomery.subset) data(sizeFactors.subset) data(uCovar) cqn.subset <- cqn(montgomery.subset, lengths = uCovar$length, x = uCovar$gccontent, sizeFactors = sizeFactors.subset, verbose = TRUE) cqnplot(cqn.subset, n = 1)