generateIndividualPlots {countsimQC} | R Documentation |
Generate separate plots for all evaluation criteria using the collection of
ggplot objects that can be saved when generating a countsimQC report (by
setting savePlots = TRUE
).
generateIndividualPlots(ggplotsRds, device = "png", outputDir = "./", nDatasets = 2)
ggplotsRds |
The path to a .rds file generated by
|
device |
One of "eps", "ps", "tex" (pictex), "pdf", "jpeg", "tiff",
"png", "bmp", "svg" or "wmf" (windows only) (will be provided to the
|
outputDir |
The output directory where the plots should be generated. |
nDatasets |
The number of data sets that are compared in the figures. This is needed to set the size of the plots correctly. |
Nothing is returned, but plots are generated in the designated output directory.
Charlotte Soneson
## Load example data data(countsimExample) ## Not run: ## Generate report countsimQCReport(countsimExample, outputDir = "./", outputFile = "example.html", savePlots = TRUE) ## Generate individual plots generateIndividualPlots("example_ggplots.rds", nDatasets = 3) ## End(Not run)