plot_accumulation {TFHAZ} | R Documentation |
For each chromosome base (x axis), this function plots the value of accumulation (y axis) calculated with the accumulation function. The plot is saved in a ".png" file. If the accumulation input was found with chr = "all", the chromosomes (one or more) to be considered can be chosen.
plot_accumulation(accumulation, chr = NULL)
accumulation |
a list of four elements, as the output of the accumulation function, containing: a sparse vector with accumulation values, the accumulation type, a chromosome name, and the half-width of the window used for the accumulation count. |
chr |
optional argument, needed if the accumulation input was found with chr = "all"; a string or a vector containing strings with the name of the chromosome(s) (e.g., "chr1" or c("chr1", "chr4")) to be considered. |
None, the function is invoked for its side effect.
# loading dataset data("data_man") # TF_acc_w_0 is in the data_man collection of datasets # plot accumulation vector plot_accumulation(TF_acc_w_0)