mergeProbability {SubCellBarCode} | R Documentation |
Compartment levels classifications are summed up to associated neighborhood levels. It is a helper function.
mergeProbability(df)
df |
data.frame; all predictions at the neighborhood level and probablity vectors for each protein |
merged.df
{ #create mock data df <- data.frame(Protein = "TP53", S1 = as.numeric(0.02), S2 = as.numeric(0.02), S3 = as.numeric(0.02), S4 = as.numeric(0.02), N1 = as.numeric(0.72), N2 = as.numeric(0.02), N3 = as.numeric(0.02), N4 = as.numeric(0.02), C1 = as.numeric(0.02), C2 = as.numeric(0.02), C3 = as.numeric(0.02), C4 = as.numeric(0.02), C5 = as.numeric(0.02), M1 = as.numeric(0.02), M2 = as.numeric(0.02)) rownames(df) <- "TP53" merged.df <- mergeProbability(df) }