cluster-spectrum {SomaticSignatures}R Documentation

Cluster Mutational Spectrum

Description

Cluster the mutational spectrum by sample or motif.

Usage

clusterSpectrum(m, by = c("sample", "motif"), distance = "Cosine", ...)

Arguments

m

Mutational spectrum matrix

by

Dimension to cluster by.

distance

Distance function used in the clustering.

...

Additional arguments passed to 'hclust'.

Details

Hierachical clustering of the motif matrix aka mutational spectrum.

Value

An 'hclust' object.

See Also

hclust

dist


[Package SomaticSignatures version 2.20.0 Index]