RPT {OmicsMarkeR} | R Documentation |
A variation on the F-measure (precision and recall) to assess robustness versus classification performance.
RPT(stability, performance, beta = 1)
stability |
Stability metric i.e. result from jaccard, sorensen, etc. |
performance |
Model performance e.g. accuracy |
beta |
Relative of importance of stability versus performance.
Default |
Harmonic mean of robustness and classification performance
Saeys Y., Abeel T., et. al. (2008) Machine Learning and Knowledge Discovery in Databases. 313-325. http://link.springer.com/chapter/10.1007/978-3-540-87481-2_21
# RPT demo RPT(stability=0.85, performance=0.90, beta=1)