pdata_fdata_adata.to.rccSet {NanoStringQCPro} | R Documentation |
Second stage of readRccBatch()/readRccCollectorToolExport() – not intended for external use.
pdata_fdata_adata.to.rccSet(pdata_fdata_adata)
pdata_fdata_adata |
List containing the pdata, fdata, and adata returned by rccFiles.to.pdata_fdata_adata() or nSolverCsv.to.pdata_fdata_adata(). |
Note that a pseudo-count of 1 is always added to all measurements, to enable subsequent log transformation of the data in cases where zero-counts are present.
N.B. The function currently expects certain columns to be present in
pdata_fdata_a_data$pdata.m
, and it converts these to numerics. These
expectations should be incorporated into the class definition, and
conversion should only take place with a warning. Future updates will
address this.
An RccSet
whose contents reflect the input data.
Robert Ziman