prepareMOFA {MOFA} | R Documentation |
Function to prepare a MOFAmodel
object for training.
Here, data, input/output option are specified and data, model and training options can be set.
prepareMOFA(object, DataOptions = NULL, ModelOptions = NULL, TrainOptions = NULL)
object |
an untrained |
DataOptions |
list of DataOptions (see |
ModelOptions |
list of ModelOptions (see |
TrainOptions |
list of TrainOptions (see |
Returns an untrained MOFAmodel
with specified data, model and training options.
Next step is to train the model with runMOFA
# load data data("CLL_data", package = "MOFAdata") #create a MOFAmodel object MOFAobject <- createMOFAobject(CLL_data) # set options TrainOptions <- getDefaultTrainOptions() ModelOptions <- getDefaultModelOptions(MOFAobject) DataOptions <- getDefaultDataOptions() # prepare MOFAmodel object for training MOFAobject <- prepareMOFA(MOFAobject, DataOptions = DataOptions, ModelOptions = ModelOptions, TrainOptions = TrainOptions ) MOFAobject