summary.thresholdSCRNACountMatrix {MAST}R Documentation

Summarize the effect of thresholding

Description

Returns the proportion of (putative) expression, the variance of expressed cells, and -log10 shapiro-wilk tests for normality on the expressed cells

Usage

## S3 method for class 'thresholdSCRNACountMatrix'
summary(object, ...)

## S3 method for class 'summaryThresholdSCRNA'
print(x, ...)

Arguments

object

a thresholdSCRNACountMatrix

...

currently ignored

x

a summaryThresholdSCRNA object, ie output from summary.thresholdSCRNACountMatrix

Value

a list of statistics on the original data, and thresholded data

Methods (by generic)


[Package MAST version 1.10.0 Index]