zScoreThrethold {InPAS}R Documentation

calculate local background cutoff value

Description

calculate local background cutoff value based on z-score

Usage

zScoreThrethold(background, introns, totalCov, utr3, z = 2)

Arguments

background

background range

introns

GRanges of introns

totalCov

total coverage of output of totalCoverage

utr3

output of utr3Annotation

z

z score cut off value

Value

a numeric vector

Author(s)

Jianhong Ou


[Package InPAS version 1.16.3 Index]