Brick_list_matrix_mcols {HiCBricks}R Documentation

List the matrix metadata columns in the Brick store.

Description

Brick_get_matrix_mcols will list the names of all matrix metadata columns.

Usage

Brick_list_matrix_mcols(Brick, chr1, chr2)

Arguments

Brick

Required. A string specifying the path to the Brick store created with CreateBrick.

chr1

Required. A character vector of length 1 specifying the chromosome corresponding to the rows of the matrix

chr2

Required. A character vector of length 1 specifying the chromosome corresponding to the columns of the matrix

Value

Returns a vector containing the names of all matrix metadata columns

Examples

Brick.file <- system.file("extdata", "test.hdf", package = "HiCBricks")
Brick_list_matrix_mcols(Brick = Brick.file, chr1 = "chr19", chr2 = "chr19")

[Package HiCBricks version 1.2.0 Index]