methDataSet-class {ENmix}R Documentation

Class "methDataSet"

Description

A class for storing Illumina methylation array methylated and unmethylated intensity data, and CpG annotation infomation.

Usage

methDataSet(Meth = new("matrix"), Unmeth = new("matrix"),
    rowData=new("DataFrame"),...)

Arguments

Meth

A matrix of methylated intensity values with row for CpGs and column for samples

Unmeth

A matrix of unmethylated intensity values with row for CpGs and column for samples

rowData

A dataframe contains CpG annotation information

...

Other arguments for class SummarizedExperiment

Value

An object of class methDataSet

Examples

showClass("methDataSet")

[Package ENmix version 1.21.6 Index]