getSequencesFromAlignmentFile {DiffLogo}R Documentation

extracts the sequences from an alignment file

Description

extracts the sequences from an alignment file

Usage

getSequencesFromAlignmentFile(filename)

Arguments

filename

the alignment file

Value

a vector of sequences

Examples

fileName = "extdata/alignments/calamodulin_1.txt"
file = system.file(fileName, package = "DiffLogo")
sequences = getSequencesFromAlignmentFile(file)

[Package DiffLogo version 2.8.0 Index]