ODToFluxBounds {CoRegFlux} | R Documentation |
ODToFluxBounds
ODToFluxBounds(odRate, model, metabolites_rates = NULL, biomass_flux_index = get_biomass_flux_position(model))
odRate |
The values of OD measured over time |
model |
An object of class modelOrg, the metabolic model. |
metabolites_rates |
A data.frame containing the extraneous metabolites, their initial concentrations and their uptake rates. Columns must be named "names","concentrations" and "rates". |
biomass_flux_index |
Optional. index of the flux corresponding to the biomass reaction. |
Flux bounds from OD