CreateCG {CausalR} | R Documentation |
Creates a CG network from a .sif file. Takes in a .sif file output from Cytoscape, and creates an 'igraph' representing the network. The edges will be annotated with the type of interaction and a weight (1 for activation and -1 for inhibition)
CreateCG(sifFile)
sifFile |
the path of the .sif file that contains all the information about the network Load in .sif file |
a CG network
# get path to example .sif file network <- system.file(package='CausalR', 'extdata', 'testNetwork.sif') #create cg cg = CreateCG(network)