StatusHeatmap {CNVPanelizer}R Documentation

StatusHeatmap

Description

Generates a status heapmap for all samples analyzed

Usage

            StatusHeatmap(dfData,
                          statusColors = c("Deletion" = "blue",
                                           "Normal" = "green",
                                           "Amplification" = "red"),
                          header = "Status Heatmap",
                          filepath = "CNVPanelizerHeatMap.png")

Arguments

dfData

data frame with the "Amplification", "Deletion" and "Normal" status

statusColors

A named vector with the colors associated with each level

header

Header text at the plot

filepath

Filepath where the generated heatmap is saved

Value

Returns the filepath of the saved Heatmap

Author(s)

Cristiano Oliveira

Examples

    
    
            StatusHeatmap(dfData,
                          statusColors = c("Deletion" = "blue",
                                           "Normal" = "green",
                                           "Amplification" = "red"),
                          header = "Status Heatmap",
                          filepath = "CNVPanelizerHeatMap.png")
    

[Package CNVPanelizer version 1.16.0 Index]