ExtractSingleDrug {synergyfinder}R Documentation

Extract single drug response from matrix

Description

ExtractSingleDrug extracts the dose-response values of single drug ( drug added in column or row) from a drug combination dose-response matrix.

Usage

ExtractSingleDrug(response.mat, dim = "row")

Arguments

response.mat

A drug cobination dose-response matrix. It's column name and row name are representing the concerntrations of drug added to column and row, respectively. The values in matrix indicate the inhibition rate to cell growth.

dim

A character. It should be either "col" or "row" to indicate which drug's dose-response value will be extracted.

Value

A data frame. It contains two variables:

Author(s)

Shuyu Zheng shuyu.zheng@helsinki.fi

Examples

data("mathews_screening_data")
data <- ReshapeData(mathews_screening_data)
response.mat <- data$dose.response.mats[[1]]
drug.row <- ExtractSingleDrug(response.mat, dim = "row")

[Package synergyfinder version 1.10.2 Index]