easyLoad_broadPeak {seqsetvis}R Documentation

easyLoad_broadPeak takes a character vector of file paths to narrowPeak files from MACS2 and returns a named list of GRanges.

Description

easyLoad_broadPeak takes a character vector of file paths to narrowPeak files from MACS2 and returns a named list of GRanges.

Usage

easyLoad_broadPeak(file_paths, file_names = NULL)

Arguments

file_paths

character vector of paths to narrowPeak files. If named, those names will be used in output unless overriden by providing file_names.

file_names

character vector of names for output list. If not NULL will override any existing names for file_paths. Default is NULL.

Value

a named list of GRanges loaded from file_paths

Examples

bp_f = system.file("extdata/test_loading.broadPeak",
    package = "seqsetvis", mustWork = TRUE)
easyLoad_broadPeak(bp_f, "my_broadPeak")

[Package seqsetvis version 1.4.0 Index]