cellCellSimulate {scTensor}R Documentation

Parameter Simulate for scTensor

Description

All parameters is saved to metadata slot of SingleCellExperiment object.

Usage

cellCellSimulate(params = newCCSParams(), verbose = TRUE)

Arguments

params

A parameter object generated by newCCSParams().

verbose

Whether the message is outputted or not (Default: TRUE).

Value

A list object containing simcount, LR, celltype, and LR_CCI. simcount is the synthetic count matrix, LR is the synthetic ligand-receptor pair list, celltype is the vector to specity the celltype of the each column of simcount, and LR_CCI is the vector to specify the CCI of the each row of LR.

Author(s)

Koki Tsuyuzaki

Examples

showMethods("cellCellSimulate")

[Package scTensor version 1.0.0 Index]