plot_adapter_content {qckitfastq} | R Documentation |
Creates a bar plot of the top 5 most present adapter sequences.
plot_adapter_content(ac_sorted, output_file = NA)
ac_sorted |
Sorted table of adapters and counts. |
output_file |
File to save data frame to. Default NA. |
Barplot of top 5 most frequent adapter sequences.
if(.Platform$OS.type != "windows") { infile <- system.file("extdata", "test.fq.gz", package = "qckitfastq") ac_sorted <- adapter_content(infile) plot_adapter_content(ac_sorted) }