getSplicingEventFromGenes {psichomics} | R Documentation |
Retrieve alternative splicing events based on given genes
getSplicingEventFromGenes(genes, ASevents)
genes |
Character: gene symbols (or TCGA-styled gene symbols) |
ASevents |
Character: alternative splicing events to be matched |
Character containing respective alternative splicing events
ASevents <- c("SE_1_+_201763003_201763300_201763374_201763594_NAV1", "SE_1_+_183515472_183516238_183516387_183518343_SMG7", "SE_1_+_183441784_183471388_183471526_183481972_SMG7", "SE_1_+_181019422_181022709_181022813_181024361_MR1", "SE_1_+_181695298_181700311_181700367_181701520_CACNA1E") genes <- c("NAV1", "SMG7", "MR1", "HELLO") getSplicingEventFromGenes(genes, ASevents)